corebio.resource.scop.Domain

Package corebio :: Package resource :: Module scop :: Class Domain

Type Domain

object --+    
         |    
      Node --+
             |
            Domain

A SCOP domain. A leaf node in the Scop hierarchy.

- sid      -- The SCOP domain identifier. e.g. 'd5hbib_'
- residues -- A Residue object. It defines the collection
              of PDB atoms that make up this domain.

Method Summary
	`__init__(self)` A new, uninitilized SCOP node.
	`__str__(self)`
	`to_cla_record(self)` Return a cla.Record...
	`to_des_record(self)` Return a des.Record...
Inherited from Node
	`ascendent(self, node_type)` Return the ancestor node of the given type, or None.
	`descendents(self, node_type)` Return a list of all decendent nodes of the given type.
	`to_hie_record(self)` Return an Hie.Record...
Inherited from object
	`__delattr__(...)` x.__delattr__('name') <==> del x.name...
	`__getattribute__(...)` x.__getattribute__('name') <==> x.name...
	`__hash__(x)` x.__hash__() <==> hash(x)...
	`__new__(T, S, ...)` T.__new__(S, ...) -> a new object with type S, a subtype of T...
	`__reduce__(...)` helper for pickle...
	`__reduce_ex__(...)` helper for pickle...
	`__repr__(x)` x.__repr__() <==> repr(x)...
	`__setattr__(...)` x.__setattr__('name', value) <==> x.name = value...

Method Details

init(self)
(Constructor)

A new, uninitilized SCOP node.

Overrides:: corebio.resource.scop.Node.__init__ (inherited documentation)

to_cla_record(self)

Return a cla.Record

to_des_record(self)

Return a des.Record

Overrides:: corebio.resource.scop.Node.to_des_record

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Type Domain

__init__(self) (Constructor)

to_cla_record(self)

to_des_record(self)

init(self)
(Constructor)