Everything

---

All Classes
corebio.resource.astral.Raf
corebio.resource.astral.RafSeqMap
corebio.resource.astral.Res
corebio.resource.scop.ClaRecord
corebio.resource.scop.DesRecord
corebio.resource.scop.Domain
corebio.resource.scop.DomRecord
corebio.resource.scop.HieRecord
corebio.resource.scop.Node
corebio.resource.scop.Residues
corebio.resource.scop.Scop
corebio.resource.stride.Res
corebio.resource.stride.Stride
corebio.seq.Alphabet
corebio.seq.Seq
corebio.seq.SeqList
corebio.ssearch_io.Alignment
corebio.ssearch_io.Annotation
corebio.ssearch_io.Hit
corebio.ssearch_io.Report
corebio.ssearch_io.Result
corebio.transform.GeneticCode
corebio.transform.Transform
corebio.utils.deoptparse.DeHelpFormatter
corebio.utils.deoptparse.DeOption
corebio.utils.deoptparse.DeOptionParser
corebio.utils.FileIndex
corebio.utils.frozendict
corebio.utils.Reiterate
corebio.utils.Token

All Exceptions
corebio.utils.ArgumentError

All Functions
argmax
argmin
cmp_sccs
crc32
crc64
data_filename
data_object
data_stream
data_string
digamma
dna
entropy
factorial
fcmp
find_command
format_extensions
format_names
gamma
incomplete_gamma
index
invert_dict
isblank
isfloat
isint
iterseq
iterseq
iterseq
iterseq
iterseq
iterseq
iterseq
iterseq
iterseq
iterseq
iterseq
iterseq
lngamma
log2
main
mask_low_complexity
normalize_letters
normalized_incomplete_gamma
parse_domain
protein
read
read
read
read
read
read
read
read
read
read
read
read
read
read
read
readseq
remove_whitespace
rna
stdrepr
Struct
trigamma
update
write
write
write
write
write
write
writeseq
writeseq
writeseq
writeseq
writeseq
writeseq

All Variables
__version__
amino_acid_alternative_letters
amino_acid_ambiguity
amino_acid_composition
amino_acid_extended_letters
amino_acid_letters
amino_acid_mass
amino_acid_names
astral_evalues
astral_evalues_filenames
astral_percent_identities
catalan
description
dna_alphabet
dna_ambiguity
dna_extended_letters
dna_letters
dna_mass
end_header
euler_gamma
example
example
example
example
example
example
example
example
extended_three_to_one
extensions
extensions
extensions
extensions
extensions
extensions
extensions
extensions
extensions
extensions
extensions
extensions
extensions
formats
generic_alphabet
golden_ratio
header_line
kyte_doolittle_hydrophobicity
names
names
names
names
names
names
names
names
names
names
names
names
names
nodeCodeDict
nodeCodeOrder
nucleic_alphabet
nucleotide_names
one_to_three
protein_alphabet
reduced_nucleic_alphabet
reduced_protein_alphabet
resource_names
rna_alphabet
rna_ambiguity
rna_extended_letters
rna_letters
rna_mass
seq_line
sqrt_2pi
standard_three_to_one
stride_alphabet
stride_alphabet_names
type_code
unambiguous_dna_alphabet
unambiguous_protein_alphabet
unambiguous_rna_alphabet